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Table 1 Primers used for quantitative RT-PCR analysis

From: Activation of peroxisome proliferator activated receptor alpha ameliorates ethanol mediated liver fibrosis in mice

Gene

Product length

Primer sequences

PPARα

149 bp

F 5’-GATGTCACACAATGCAATTCG -3’

R 5’-GGTAGGCTTCGTGGATTCTCT -3’

TNF-α

300 bp

F 5’-GGCAGGTCTACTTTGGAGTCATTGC-3’

R 5’-ACATTCGAGGCTCCAGTGAATTCGG-3’

IL-10

142bp

F 5’-TGCTGCCTGCTCTTACTGAC-3’

R 5’-AGAAAGTCTTCACCTGGCTGA-3’

OPN

121 bp

F 5’-GGTGATAGCTTGGCTTATGGAC-3’

R 5’-CCTTAGACTCACCGCTCTTCAT-3’

TGF-β1

272 bp

F 5’-CAACGCCATCTATGAGAAAACC-3’

R 5’ -ACTGCCGTACAACTCCAGTGAC-3’

visfatin

172 bp

F 5’- GGAAAGACCATGAGAAAGATGC-3’

R 5’-CTGATGATTAGTGGTGCCTCTG-3’

PI3K

198 bp

F 5’- GCACGGCGATTACACTCTTAC-3’

R 5’-TTGGACACTGGGTAGAGCAAC-3’

MMP-2

203 bp

F 5’- TTGTGCTGAAAGATACCCTCAA-3’

R 5’-CAGGTCAGGTGTGTAACCAATG-3’

MMP-9

242 bp

F 5’-TGAATCAGCTGGCTTTTGTG-3’

R 5’-GTGGATAGCTCGGTGGTGTT-3’

adiponectin

202 bp

F 5’-CCAGTATCAGGAAAAGAATGTGG-3’

R 5’-TGGTGTATGGGCTATGGGTAGT-3’

HO-1

427 bp

F 5’-AACAAGCAGAACCCAGTCTATG-3’

R 5’-TGAGCAGGAAGGCGTCTTA-3’

GAPDH

233 bp

F 5’-GGTGAAGGTCGGTGTGAACG-3’

  

R 5’-CTCGCTCCTGGAAGATGGTG-3’

  1. Abbreviations: PPARα, peroxisome proliferator activated receptor alpha; TNF-α, tumor necrosis factor-alpha; IL-10, interleukin-10; OPN, osteopontin; TGF-β1, transforming growth factor-beta 1; PI3K, phosphatidylinositol 3-kinase; MMP-2, matrix metalloproteinase-2; MMP-9, matrix metalloproteinase-9; HO-1, heme oxygenase-1; GAPDH, glyceraldehyde-3-phosphate dehydrogenase.